Unveiling the Different Reactivity of Bent and Linear Three-Atom-Components Participating in [3 + 2] Cycloaddition Reactions
Mar Ríos Gutiérrez, Luis Domingo, Fatemeh Ghodsi
Organics · pp. 274–286 · Published 13 Aug 2021
10.3390/org2030014Abstract
The reactivity of a series of pairs of bent and linear three-atom-component (B-TACs and L-TACs) participating in [3 + 2] cycloaddition (32CA) reactions towards ethylene and electrophilic dicyanoethylene (DCE) have been studied within the Molecular Electron Density Theory. While the pseudodiradical structure of B-TACs changes to that of pseudoradical or carbenoid L-TACs upon dehydrogenation, zwitterionic B-TACs remain unchanged. Conceptual Density Functional Theory (CDFT) indices characterize five of the nine TACs as strong nucleophiles participating in polar reactions towards electrophilic ethylenes. The activation energies of the 32CA reactions with electrophilic DCE range from 0.5 to 22.0 kcal·mol−1, being between 4.3 and 9.1 kcal·mol−1 lower than those with ethylene. In general, B-TACs are more reactive than their L-TAC counterparts. A change in the regioselectivity is found in these polar 32CA reactions; in general, while B-TACs are meta regioselective, L-TACs are ortho regioselective. The geometrical parameters of the transition state structures suggest that the formation of the single bond involving the most electrophilic carbon of DCE is more advanced. A change in the asynchronicity in the reactions involving B-TACs and L-TACs is also found.
References (37)
- 1 Moss, 1995, Glossary of class names of organic compounds and reactivity intermediates based on structure [DOI]
- 2 Carruthers, W. (1990). Cycloaddition Reactions in Organic Synthesis, Pergamon.
- 3 Padwa, A. (1984). 1,3-Dipolar Cycloaddition Chemistry, Wileynterscience.
- 4 Domingo, L.R. (2016). Molecular electron density theory: A modern view of reactivity in organic chemistry. Molecules, 21. [DOI]
- 5 Ríos-Gutiérrez, M., and Domingo, L.R. (2019). Unravelling the mysteries of the [3 + 2] cycloaddition reactions. Eur. J. Org. Chem., 267–282. [DOI]
- 6 Domingo, 2009, Understanding the mechanism of polar Diels–Alder reactions [DOI]
- 7 Domingo, 2014, A new C-C bond formation model based on the quantum chemical topology of electron density [DOI]
- 8 Domingo, 2017, How does the global electron density transfer diminish activation energies in polar cycloaddition reactions? A Molecular Electron Density Theory study [DOI]
- 9 Domingo, 2020, A Molecular Electron Density Theory Study of the Reactivity of Tetrazines in Aza-Diels-Alder Reactions [DOI]
- 10 Domingo, L.R., Kula, K., and Ríos-Gutiérrez, M. (2020). Unveiling the Reactivity of Cyclic Azomethine Ylides in [3 + 2] Cycloaddition Reactions within the Molecular Electron Density Theory. Eur. J. Org. Chem., 5938–5948. [DOI]
- 11 Houk, 1995, Pericyclic reaction transition states: Passions and punctilios, 1935–1995 [DOI]
- 12 Sustmann, 1972, Substituent Effects in 1,3-Dipolar Cycloadditions of Phenyl Azid [DOI]
- 13 Domingo, 2018, The Mysticism of Pericyclic Reactions: A Contemporary Rationalisation of Organic Reactivity Based on Electron Density Analysis [DOI]
- 14 Zhao, 2004, Hybrid Meta Density Functional Theory Methods for Thermochemistry, Thermochemical Kinetics, and Noncovalent Interactions: The MPW1B95 and MPWB1K Models and Comparative Assessments for Hydrogen Bonding and van der Waals Interactions [DOI]
- 15 Hehre, M.J., Radom, L., Schleyer, P.v.R., and Pople, J. (1986). Ab Initio Molecular Orbital Theory, Wiley.
- 16 Schlegel, 1982, Optimization of equilibrium geometries and transition structures [DOI]
- 17 Yarkony, D.R. (1994). Modern Electronic Structure Theory, World Scientific Publishing. [DOI]
- 18 Fukui, 1970, Formulation of the reaction coordinate [DOI]
- 19 Schlegel, 1990, Reaction path following in mass-weighted internal coordinates [DOI]
- 20 Schlegel, 1991, Improved algorithms for reaction path following: Higher-order implicit algorithms [DOI]
- 21 Becke, 1990, A simple measure of electron localization in atomic and molecular-systems [DOI]
- 22 Reed, 1985, Natural population analysis [DOI]
- 23 Reed, 1988, Intermolecular interactions from a natural bond orbital, donor-acceptor viewpoint [DOI]
- 24 Parr, R.G., and Yang, W. (1989). Density Functional Theory of Atoms and Molecules, Oxford University Press.
- 25 Domingo, L.R., Ríos-Gutiérrez, M., and Pérez, P. (2016). Applications of the conceptual density functional indices to organic chemistry reactivity. Molecules, 21. [DOI]
- 26 Parr, 1999, Electrophilicity index [DOI]
- 27 Parr, 1983, Absolute hardness: Companion parameter to absolute electronegativity [DOI]
- 28 Domingo, 2008, Understanding the reactivity of captodative ethylenes in polar cycloaddition reactions. A theoretical study [DOI]
- 29 Kohn, 1965, Self-consistent equations including exchange and correlation effects [DOI]
- 30 Domingo, 2013, Understanding the local reactivity in polar organic reactions through electrophilic and nucleophilic Parr functions [DOI]
- 31 Frisch, M.J., Trucks, G.W., Schlegel, H.B., Scuseria, G.E., Robb, M.A., Cheeseman, J.R., Scalmani, G., Barone, V., Petersson, G.A., and Fox, D.J. (2016). Gaussian 16, Gaussian, Inc.. Revision, A.03.
- 32 Noury, 1999, Computational tools for the electron localization function topological analysis [DOI]
- 33 Dennington, R., Keith, T.A., and Millam, J.M. (2016). Gauss View, Semichem Inc.. Version 6.0.
- 34 Huisgen, 1961, 1,3-Dipolar Cycloadditions
- 35 Chamorro, 2020, A close look to the oxaphosphetane formation along the Wittig reaction: A [2 + 2] cycloaddition? [DOI]
- 36 Aurell, 2004, A theoretical study on the regioselectivity of 1,3-dipolar cycloadditions using DFT-based reactivity indexes [DOI]
- 37 Hammond, 1955, A Correlation of Reaction Rates [DOI]
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