Skip to content
Research Article Open access CC BY 3.0

Quantitative Real-Time PCR for Determination of Transgene in Callus of Jatropha curcas

Wilson Thau Lym Yong, Stepfanie Evert Jole, Kenneth Francis Rodrigues, Jualang Azlan Gansau

Annual Research & Review in Biology · pp. 874–885 · Published 9 Dec 2013

10.9734/ARRB/2014/7315

Abstract

Jatropha curcas is an important plant belonging to the family Euphorbiaceae which is a potential candidate for biofuel production. Genetic transformation protocol for J. curcas callus mediated by Agrobacterium tumefaciens were optimized using a pCAMBIA1303 plasmid which carries green fluorescent protein (GFP) gene as a reporter. Results obtained were based on the highest percentage of GFP expression which was observed three days post-transformation. Immersion of callus into 1×105 cfu ml-1 (OD600nm 0.6) of A. tumefaciens LBA4404 with addition of 300 µM of acetosyringone for 45 min, two days of pre-culture and three days of co-cultivation periods were determined to be ideal for J. curcas callus transformation. Putative transformants were selected in the presence of 25 mg/l hygromycin. Surviving calli were transferred into proliferation media (MS with 1 mg/l NAA and 1 mg/l BAP) to proliferate the callus for further molecular analyses and to confirm the presence of the target GFP transgene in the putative transformants. Polymerase chain reaction (PCR) was carried out using a 35S specific primer pair confirmed the presence of the 454 bp of 35S promoter region from the transformed callus. Quantitative real-time PCR (qRT-PCR) was carried out to demonstrate the integration and copy number of the 35S promoter in the putative tranformants. The 35S promoter gene (178 bp) as a target gene and J. curcas actin gene (179 bp) which functions as reference gene was designed to detect the positive transformants and control sample in real-time PCR reaction analysis. The results indicated that the actin specific PCR product was present in both the control and transformed calli, however the 35S PCR product was found only in the positive transformants. The similarity in CT values confirmed that both the genes were present as single copy thus confirming a single integration event.

Agrobacterium tumefaciens genetic transformation green fluorescent protein putative transformants

References (32)

  1. 1 Molecular Cloning: A Laboratory Manual
  2. 2 A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures [DOI]
  3. 3 GUS fusions: beta‐glucuronidase as a sensitive and versatile gene fusion marker in higher plants. [DOI]
  4. 4 Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays [DOI]
  5. 5 Kinetic PCR Analysis: Real-time Monitoring of DNA Amplification Reactions [DOI]
  6. 6 Expression of bacterial genes in plant cells. [DOI]
  7. 7 PCR technology for screening and quantification of genetically modified organisms (GMOs) [DOI]
  8. 8 Estimating the copy number of transgenes in transformed rice by real-time quantitative PCR [DOI]
  9. 9 Detoxification of a toxic variety of Jatropha curcas using heat and chemical treatments, and preliminary nutritional evaluation with rats [DOI]
  10. 10 Transgene organization in rice engineered through direct DNA transfer supports a two-phase integration mechanism mediated by the establishment of integration hot spots [DOI]
  11. 11 Detection and quantification of the iap gene of Listeria monocytogenes and Listeria innocua by a new real-time quantitative PCR assay [DOI]
  12. 12 Transgenic tea [Camellia sinensis (L.) O. Kuntze cv. Kangra Jat] plants obtained by Agrobacterium-mediated transformation of somatic embryos [DOI]
  13. 13 Agrobacterium-mediated transformation of apple (Malus x domestica Borkh.): an assessment of factors affecting gene transfer efficiency during early transformation steps [DOI]
  14. 14 Establishment of an Agrobacteriuim-mediated cotyledon disc transformation method for Jatropha curcas [DOI]
  15. 15 Agrobacterium-mediated transformation of cauliflower: Optimization of protocol and development of Bt-transgenic cauliflower [DOI]
  16. 16 Estimating number of transgene copies in transgenic rapeseed by real-time PCR assay withHMG I/Y as an endogenous reference gene [DOI]
  17. 17 Quantitative real-time PCR as a screening tool for estimating transgene copy number in WHISKERS™-derived transgenic maize [DOI]
  18. 18 Factors that influence Agrobacterium rhizogenes -mediated transformation of broccoli ( Brassica oleracea L. var. italica ) [DOI]
  19. 19 Qualitative and Quantitative PCR Methods for Event-specific Detection of Genetically Modified Cotton Mon1445 and Mon531 [DOI]
  20. 20 Agrobacterium tumefaciens-mediated transformation of biofuel plant Jatropha curcas using kanamycin selection
  21. 21 Determination of Transgene Copy Number by Real-Time Quantitative PCR [DOI]
  22. 22 Jatropha: The Biodiesel Plant Biology, Tissue Culture and Genetic Transformation - A Review
  23. 23 An alternative source for regenerable organogenic callus induction in Jatropha curcas L.
  24. 24 Influence of Preassay and Sequence Variations on Viral Load Determination by a Multiplex Real-Time Reverse Transcriptase–Polymerase Chain Reaction for Feline Immunodeficiency Virus [DOI]
  25. 25 Quantitation of genetically modified organisms in food [DOI]
  26. 26 Optimization of Agrobacterium-mediated transformation parameters for Melastomataceae spp. using green fluorescent protein (GFP) as a reporter [DOI]
  27. 27 Agrobacterium tumefaciens-mediated transformation protocol of Jatropha curcas L. using leaf and hypocotyl segments [DOI]
  28. 28 Genetic transformation of Sorghum bicolor [DOI]
  29. 29 Real-time detection of PCR products and microbiology
  30. 30 EXTRACTION OF GENOMIC DNA FROM JATROPHA sp. USING MODIFIED CTAB METHOD
  31. 31 Semi-quantitative detection of genetically modified grains based on CaMV 35S promoter amplification [DOI]
  32. 32 Biofuel: The little shrub that could - maybe [DOI]

Cited by 2

Showing 1 of 2 known citations — external sources report more than can currently be individually listed.

Article metrics

Real usage data collected on this platform.

3

Page views

0

PDF downloads

0

Outbound clicks

2

Citations

Views over time

Views by country

Approximate, from request IP at view time — not citizenship or institution. Countries with fewer than 5 views are grouped as "Other".

Traffic sources

Referring site, by host.

Views and downloads exclude known bots/crawlers. Citations combines this platform's own DOI-resolved index with each external source's own reported total — see Cited by above for individually listed citing works. Last refreshed 0 seconds ago.